A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2749882



Internal ID9984166
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:74794093..74794357hg38UCSC Ensembl
Outerchr15:75086434..75086698hg19UCSC Ensembl
Cytoband15q24.1
Allele length
AssemblyAllele length
hg38265
hg19265
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv307e201
Supporting Variantsessv6879791, essv6788193, essv6776092, essv6809717, essv6724892, essv6706585, essv6909297, essv6857888, essv6673862, essv6901720, essv6862916, essv6755895, essv6772497, essv6942496, essv6665346, essv6869542, essv6867705, essv6842879, essv6851890, essv6800661, essv6678246, essv6871057, essv6732537
SamplesSSM075, SSM045, SSM011, SSM065, SSM087, SSM093, SSM088, SSM058, SSM084, SSM090, SSM047, SSM069, SSM029, SSM089, SSM032, SSM003, SSM031, SSM014, SSM086, SSM066, SSM040, SSM072, SSM012
Known GenesCSK
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2749882
Frequency
Sample Size96
Observed Gain0
Observed Loss23
Observed Complex0
Frequencyn/a


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