A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2749610



Internal ID10330580
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr15:41561329..41562549hg38UCSC Ensembl
Outerchr15:41853527..41854747hg19UCSC Ensembl
Cytoband15q15.1
Allele length
AssemblyAllele length
hg381221
hg191221
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6788164, essv6842847, essv6911217, essv6873974, essv6741309, essv6932280, essv6835244, essv6824018, essv6831703
SamplesSSM079, SSM002, SSM084, SSM069, SSM081, SSM082, SSM020, SSM007, SSM091
Known GenesTYRO3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2749610
Frequency
Sample Size96
Observed Gain0
Observed Loss9
Observed Complex0
Frequencyn/a


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