A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2749162



Internal ID10330132
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr14:103131693..103132745hg38UCSC Ensembl
Outerchr14:103598030..103599082hg19UCSC Ensembl
Cytoband14q32.32
Allele length
AssemblyAllele length
hg381053
hg191053
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6932197, essv6698983, essv6809637, essv6741359, essv6779764, essv6966325, essv6706492, essv6897872, essv6673702, essv6713270, essv6901629, essv6971179, essv6792184, essv6768749, essv6838917, essv6831624, essv6828033, essv6851725, essv6949415, essv6775053, essv6823955, essv6977833, essv6924654, essv6846195, essv6900862, essv6806618, essv6775996, essv6920532, essv6857724, essv6888249, essv6912921, essv6695903, essv6772389, essv6668372, essv6691880, essv6959836, essv6936490
SamplesSSM100, SSM036, SSM008, SSM083, SSM027, SSM024, SSM075, SSM064, SSM079, SSM065, SSM087, SSM038, SSM074, SSM042, SSM028, SSM021, SSM018, SSM029, SSM096, SSM026, SSM017, SSM031, SSM067, SSM086, SSM066, SSM085, SSM081, SSM040, SSM020, SSM015, SSM080, SSM037, SSM070, SSM099, SSM052, SSM030, SSM012
Known GenesTNFAIP2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2749162
Frequency
Sample Size96
Observed Gain0
Observed Loss37
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer