A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2748786



Internal ID9983070
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr14:64893655..64896849hg38UCSC Ensembl
Outerchr14:65360373..65363567hg19UCSC Ensembl
Cytoband14q23.3
Allele length
AssemblyAllele length
hg383195
hg193195
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6932163, essv6755794, essv6910396, essv6765937, essv6724762, essv6689155, essv6792148, essv6912889, essv6717084, essv6940637, essv6879681, essv6740431, essv6806597, essv6941285, essv6836798, essv6695860, essv6712765, essv6673638, essv6815702, essv6763556, essv6905167, essv6768722, essv6959759, essv6835143, essv6868309, essv6867518, essv6924624, essv6783853, essv6691846, essv6901591, essv6788064, essv6900836, essv6728592, essv6882540, essv6808276, essv6846172, essv6971137, essv6897848, essv6916379, essv6713247, essv6681853, essv6752769, essv6977756, essv6842725, essv6685342, essv6702744, essv6772349, essv6761164, essv6774720, essv6870933, essv6698957, essv6920498, essv6668356, essv6936447, essv6873888, essv6945267, essv6862726, essv6741328, essv6688504, essv6973450, essv6738096, essv6949378, essv6891518, essv6966270, essv6775966, essv6953528, essv6803690, essv6857660, essv6831590
SamplesSSM100, SSM036, SSM008, SSM027, SSM024, SSM045, SSM046, SSM011, SSM064, SSM065, SSM087, SSM038, SSM097, SSM039, SSM013, SSM009, SSM073, SSM093, SSM050, SSM074, SSM042, SSM088, SSM002, SSM057, SSM023, SSM058, SSM028, SSM084, SSM090, SSM021, SSM018, SSM069, SSM061, SSM029, SSM062, SSM026, SSM089, SSM017, SSM035, SSM094, SSM003, SSM031, SSM033, SSM066, SSM006, SSM085, SSM068, SSM081, SSM082, SSM020, SSM007, SSM015, SSM016, SSM005, SSM037, SSM077, SSM022, SSM010, SSM091, SSM070, SSM025, SSM034, SSM004, SSM099, SSM043, SSM052, SSM030, SSM063, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2748786
Frequency
Sample Size96
Observed Gain0
Observed Loss69
Observed Complex0
Frequencyn/a


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