A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2748404



Internal ID9982688
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:113831633..113831958hg38UCSC Ensembl
Outerchr13:114534606..114534931hg19UCSC Ensembl
Cytoband13q34
Allele length
AssemblyAllele length
hg38326
hg19326
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6879655, essv6691811
SamplesSSM036, SSM093
Known GenesGAS6, GAS6-AS1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2748404
Frequency
Sample Size96
Observed Gain0
Observed Loss2
Observed Complex0
Frequencyn/a


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