A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2747856



Internal ID10328826
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr13:98068955..98069408hg38UCSC Ensembl
Outerchr13:98721209..98721662hg19UCSC Ensembl
Cytoband13q32.2
Allele length
AssemblyAllele length
hg38454
hg19454
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6716995, essv6681778, essv6728513, essv6977597, essv6905080, essv6876823, essv6831508, essv6870870, essv6779641, essv6724681, essv6879624, essv6746994, essv6765879, essv6971036, essv6713173, essv6807543, essv6966120, essv6888147, essv6775880, essv6673475, essv6734487, essv6940546, essv6823833, essv6691777, essv6924538, essv6873825, essv6774119, essv6897794, essv6894833, essv6885213, essv6688521, essv6800417, essv6755729, essv6949284, essv6936360, essv6851519, essv6819947, essv6758359, essv6806533, essv6959598, essv6812361, essv6792042, essv6752707, essv6796229, essv6932069, essv6720881, essv6761110, essv6838807, essv6846102
SamplesSSM059, SSM036, SSM008, SSM083, SSM071, SSM027, SSM024, SSM045, SSM046, SSM079, SSM013, SSM009, SSM093, SSM074, SSM042, SSM057, SSM058, SSM028, SSM092, SSM090, SSM021, SSM018, SSM061, SSM029, SSM096, SSM026, SSM031, SSM067, SSM044, SSM001, SSM086, SSM033, SSM066, SSM085, SSM081, SSM072, SSM020, SSM078, SSM005, SSM076, SSM022, SSM091, SSM055, SSM070, SSM095, SSM099, SSM043, SSM098, SSM063
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2747856
Frequency
Sample Size96
Observed Gain0
Observed Loss49
Observed Complex0
Frequencyn/a


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