A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2747030



Internal ID10328000
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr1:36957317..36958042hg38UCSC Ensembl
Outerchr1:37422918..37423643hg19UCSC Ensembl
Cytoband1p34.3
Allele length
AssemblyAllele length
hg38726
hg19726
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6816932, essv6816609, essv6863979, essv6847051, essv6929087
SamplesSSM089, SSM086, SSM020, SSM078, SSM010
Known GenesGRIK3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2747030
Frequency
Sample Size96
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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