A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2747027



Internal ID9981311
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:132620110..132621407hg38UCSC Ensembl
Outerchr12:133196696..133197993hg19UCSC Ensembl
Cytoband12q24.33
Allele length
AssemblyAllele length
hg381298
hg191298
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6972217, essv6876752, essv6846037, essv6768585, essv6803581, essv6936268, essv6772171, essv6787862, essv6916232, essv6706314, essv6823745, essv6905013, essv6912717, essv6831413, essv6842550, essv6939962, essv6698829, essv6800335, essv6940459, essv6677934, essv6977422, essv6827835, essv6728439, essv6720789, essv6870799, essv6685180, essv6891371, essv6741171, essv6945076, essv6888080, essv6724608, essv6900377, essv6965976, essv6716912, essv6908978, essv6713102, essv6691703, essv6953345, essv6851382, essv6931960, essv6695675, essv6773298, essv6924460, essv6894759, essv6673328, essv6739298, essv6702569, essv6970941, essv6687988, essv6949199, essv6959458, essv6709602, essv6920323, essv6897728, essv6806865, essv6838730, essv6791967, essv6668275, essv6779568, essv6681692, essv6732242, essv6796143, essv6783670, essv6775812, essv6806464
SamplesSSM036, SSM008, SSM083, SSM071, SSM027, SSM024, SSM045, SSM046, SSM064, SSM079, SSM065, SSM038, SSM097, SSM039, SSM013, SSM009, SSM073, SSM074, SSM042, SSM041, SSM023, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM018, SSM069, SSM029, SSM096, SSM026, SSM017, SSM032, SSM003, SSM031, SSM067, SSM044, SSM014, SSM086, SSM033, SSM066, SSM085, SSM068, SSM081, SSM040, SSM072, SSM020, SSM007, SSM015, SSM016, SSM005, SSM080, SSM037, SSM022, SSM070, SSM025, SSM034, SSM004, SSM099, SSM043, SSM052, SSM098, SSM030, SSM012
Known GenesP2RX2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2747027
Frequency
Sample Size96
Observed Gain0
Observed Loss65
Observed Complex0
Frequencyn/a


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