A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2746873



Internal ID10327843
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:131580193..131580671hg38UCSC Ensembl
Outerchr12:132064738..132065216hg19UCSC Ensembl
Cytoband12q24.33
Allele length
AssemblyAllele length
hg38479
hg19479
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6904998, essv6940445, essv6936255, essv6909285, essv6928010, essv6668264, essv6772149, essv6965953
SamplesSSM027, SSM065, SSM013, SSM002, SSM021, SSM019, SSM022, SSM030
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2746873
Frequency
Sample Size96
Observed Gain0
Observed Loss8
Observed Complex0
Frequencyn/a


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