A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2746860



Internal ID10327830
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:131432938..131434202hg38UCSC Ensembl
Outerchr12:131917483..131918747hg19UCSC Ensembl
Cytoband12q24.33
Allele length
AssemblyAllele length
hg381265
hg191265
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6732230, essv6894741, essv6720782, essv6857361, essv6862506, essv6713086, essv6809456, essv6695660, essv6772148, essv6842535, essv6812294, essv6846026
SamplesSSM075, SSM065, SSM087, SSM042, SSM088, SSM084, SSM047, SSM044, SSM085, SSM037, SSM076, SSM098
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2746860
Frequency
Sample Size96
Observed Gain0
Observed Loss12
Observed Complex0
Frequencyn/a


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