A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2746527



Internal ID9980811
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:124339336..124339957hg38UCSC Ensembl
Outerchr12:124823882..124824503hg19UCSC Ensembl
Cytoband12q24.31
Allele length
AssemblyAllele length
hg38622
hg19622
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6846011, essv6851318, essv6920272, essv6867261, essv6716873, essv6876733, essv6765827, essv6819794, essv6735258, essv6953297, essv6758281, essv6862482
SamplesSSM059, SSM088, SSM092, SSM089, SSM017, SSM086, SSM085, SSM078, SSM025, SSM043, SSM049, SSM063
Known GenesNCOR2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2746527
Frequency
Sample Size96
Observed Gain0
Observed Loss12
Observed Complex0
Frequencyn/a


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