A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2746381



Internal ID9980665
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:113386235..113386533hg38UCSC Ensembl
Outerchr12:113824040..113824338hg19UCSC Ensembl
Cytoband12q24.13
Allele length
AssemblyAllele length
hg38299
hg19299
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6695619, essv6842497, essv6716860
SamplesSSM084, SSM043, SSM037
Known GenesPLBD2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2746381
Frequency
Sample Size96
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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