A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2745695



Internal ID9979979
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:30084298..30090624hg38UCSC Ensembl
Outerchr12:30237231..30243557hg19UCSC Ensembl
Cytoband12p11.22
Allele length
AssemblyAllele length
hg386327
hg196327
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6912605, essv6791856, essv6939118, essv6970805, essv6831310, essv6720685, essv6796030, essv6706219, essv6716799, essv6879495, essv6867159, essv6712993, essv6916127, essv6845951, essv6851181, essv6949098, essv6876664, essv6772031, essv6735189, essv6827699, essv6899365, essv6687464, essv6971396, essv6834885, essv6763401, essv6758232, essv6768507, essv6779461, essv6806389, essv6815466, essv6862383, essv6812220, essv6775706, essv6805754, essv6834932, essv6908695, essv6924350, essv6772050
SamplesSSM059, SSM008, SSM071, SSM024, SSM064, SSM065, SSM009, SSM093, SSM074, SSM042, SSM088, SSM002, SSM028, SSM092, SSM018, SSM062, SSM089, SSM003, SSM067, SSM044, SSM086, SSM066, SSM085, SSM081, SSM040, SSM082, SSM015, SSM016, SSM005, SSM080, SSM077, SSM076, SSM010, SSM070, SSM004, SSM043, SSM049, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2745695
Frequency
Sample Size96
Observed Gain0
Observed Loss38
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer