A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2745354



Internal ID9979638
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr12:499426..499624hg38UCSC Ensembl
Outerchr12:608592..608790hg19UCSC Ensembl
Cytoband12p13.33
Allele length
AssemblyAllele length
hg38199
hg19199
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6977092
SamplesSSM029
Known GenesB4GALNT3
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2745354
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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