A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2745311



Internal ID10326281
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:134045635..134046640hg38UCSC Ensembl
Outerchr11:133915530..133916535hg19UCSC Ensembl
Cytoband11q25
Allele length
AssemblyAllele length
hg381006
hg191006
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6791804, essv6737854, essv6904869, essv6912537, essv6717264, essv6842381, essv6834499, essv6779406, essv6677763, essv6685035, essv6867085, essv6706167, essv6908809, essv6760934, essv6931781, essv6698716, essv6709444, essv6831263, essv6732073, essv6752530, essv6800163, essv6977079, essv6882283, essv6924281, essv6720632, essv6724448, essv6686909, essv6768457
SamplesSSM045, SSM064, SSM038, SSM013, SSM041, SSM057, SSM084, SSM047, SSM018, SSM061, SSM029, SSM089, SSM094, SSM032, SSM067, SSM044, SSM001, SSM014, SSM081, SSM040, SSM072, SSM020, SSM007, SSM015, SSM005, SSM010, SSM070, SSM034
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2745311
Frequency
Sample Size96
Observed Gain0
Observed Loss28
Observed Complex0
Frequencyn/a


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