A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2745287



Internal ID9979571
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:132688684..132688976hg38UCSC Ensembl
Outerchr11:132558579..132558871hg19UCSC Ensembl
Cytoband11q25
Allele length
AssemblyAllele length
hg38293
hg19293
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6702397, essv6783518, essv6965696, essv6815422, essv6806337, essv6673080, essv6867084, essv6882282, essv6959177, essv6887971, essv6728279, essv6927877, essv6724447, essv6916069, essv6931778, essv6894600, essv6900604, essv6857122, essv6891237, essv6823577, essv6709441, essv6819640, essv6851090, essv6879441, essv6970745, essv6831260, essv6677761
SamplesSSM100, SSM027, SSM045, SSM046, SSM079, SSM087, SSM097, SSM039, SSM093, SSM074, SSM041, SSM028, SSM096, SSM026, SSM089, SSM019, SSM094, SSM032, SSM031, SSM086, SSM068, SSM081, SSM020, SSM078, SSM016, SSM077, SSM098
Known GenesOPCML
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2745287
Frequency
Sample Size96
Observed Gain0
Observed Loss27
Observed Complex0
Frequencyn/a


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