A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2745096



Internal ID9979380
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:114526450..114526518hg38UCSC Ensembl
Outerchr11:114397172..114397240hg19UCSC Ensembl
Cytoband11q23.2
Allele length
AssemblyAllele length
hg3869
hg1969
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6851063, essv6959149, essv6857095
SamplesSSM086, SSM087, SSM026
Known GenesNXPE1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2745096
Frequency
Sample Size96
Observed Gain0
Observed Loss3
Observed Complex0
Frequencyn/a


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