A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2745059



Internal ID10326029
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:110155723..110156585hg38UCSC Ensembl
Outerchr11:110026448..110027310hg19UCSC Ensembl
Cytoband11q22.3
Allele length
AssemblyAllele length
hg38863
hg19863
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6912520, essv6938418, essv6771981, essv6741006, essv6668167, essv6959148, essv6857091, essv6977027
SamplesSSM065, SSM087, SSM029, SSM026, SSM003, SSM015, SSM052, SSM030
Known GenesZC3H12C
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2745059
Frequency
Sample Size96
Observed Gain0
Observed Loss8
Observed Complex0
Frequencyn/a


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