A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2745058



Internal ID10326028
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:110105941..110106303hg38UCSC Ensembl
Outerchr11:109976666..109977028hg19UCSC Ensembl
Cytoband11q22.3
Allele length
AssemblyAllele length
hg38363
hg19363
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6959147, essv6865053, essv6882274, essv6688226, essv6949014, essv6851062, essv6800136, essv6677745, essv6887953, essv6862297, essv6783500, essv6720617, essv6894588, essv6965673, essv6775634, essv6809314, essv6819616, essv6977026, essv6803446, essv6673050, essv6709430, essv6779391, essv6944856, essv6885034, essv6891216, essv6867052, essv6685019, essv6857090, essv6827635, essv6897597, essv6823563, essv6908789, essv6768440, essv6904850
SamplesSSM027, SSM024, SSM075, SSM011, SSM064, SSM079, SSM087, SSM097, SSM013, SSM073, SSM088, SSM041, SSM023, SSM029, SSM096, SSM026, SSM089, SSM035, SSM094, SSM032, SSM031, SSM067, SSM044, SSM014, SSM086, SSM066, SSM068, SSM072, SSM078, SSM080, SSM095, SSM034, SSM099, SSM098
Known GenesZC3H12C
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2745058
Frequency
Sample Size96
Observed Gain0
Observed Loss34
Observed Complex0
Frequencyn/a


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