A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2744493



Internal ID9978777
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:48920964..48933763hg38UCSC Ensembl
Outerchr11:48942516..48955315hg19UCSC Ensembl
Cytoband11p11.12
Allele length
AssemblyAllele length
hg3812800
hg1912800
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6924205, essv6768400, essv6823509, essv6870627, essv6870625, essv6763305, essv6735095, essv6710288, essv6953086, essv6749579, essv6965581, essv6783438, essv6672946, essv6681453, essv6684966, essv6686410, essv6948944, essv6862230
SamplesSSM027, SSM024, SSM064, SSM079, SSM088, SSM090, SSM018, SSM062, SSM031, SSM033, SSM006, SSM068, SSM005, SSM025, SSM034, SSM049, SSM056
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2744493
Frequency
Sample Size96
Observed Gain0
Observed Loss17
Observed Complex0
Frequencyn/a


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