A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2744487



Internal ID9978771
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:48907292..48907701hg38UCSC Ensembl
Outerchr11:48928844..48929253hg19UCSC Ensembl
Cytoband11p11.12
Allele length
AssemblyAllele length
hg38410
hg19410
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6879393, essv6735094, essv6891153, essv6965580, essv6864697, essv6724372, essv6870626, essv6783437, essv6691481, essv6809267, essv6684964, essv6712872, essv6768399, essv6894540, essv6834763, essv6760869, essv6681452, essv6862229, essv6953085, essv6688180, essv6686399, essv6944778, essv6791727, essv6916008, essv6763304, essv6970656, essv6823511, essv6806270
SamplesSSM036, SSM027, SSM075, SSM045, SSM011, SSM064, SSM079, SSM097, SSM093, SSM074, SSM042, SSM088, SSM023, SSM028, SSM090, SSM061, SSM062, SSM035, SSM033, SSM068, SSM082, SSM016, SSM005, SSM070, SSM025, SSM034, SSM098, SSM049
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2744487
Frequency
Sample Size96
Observed Gain0
Observed Loss28
Observed Complex0
Frequencyn/a


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