A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2744167



Internal ID9978451
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:18143309..18144157hg38UCSC Ensembl
Outerchr11:18164856..18165704hg19UCSC Ensembl
Cytoband11p15.1
Allele length
AssemblyAllele length
hg38849
hg19849
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6684927, essv6746702, essv6897798, essv6850918, essv6770364, essv6686131, essv6809235, essv6965514, essv6937618, essv6743904, essv6740915, essv6976854, essv6771913, essv6735070, essv6760836, essv6940158, essv6749550, essv6737764, essv6944728, essv6724339, essv6758100, essv6755408, essv6752445, essv6688144, essv6935950, essv6948901, essv6791685, essv6856945
SamplesSSM059, SSM008, SSM027, SSM024, SSM075, SSM045, SSM065, SSM087, SSM050, SSM057, SSM023, SSM058, SSM021, SSM061, SSM029, SSM035, SSM003, SSM086, SSM053, SSM005, SSM022, SSM055, SSM070, SSM034, SSM052, SSM049, SSM056, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2744167
Frequency
Sample Size96
Observed Gain0
Observed Loss28
Observed Complex0
Frequencyn/a


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