A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2744079



Internal ID10325049
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:7407341..7407707hg38UCSC Ensembl
Outerchr11:7428572..7428938hg19UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg38367
hg19367
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6970610, essv6850889, essv6698629, essv6672867, essv6783387, essv6965493, essv6884957, essv6795855, essv6779278, essv6838450, essv6944712, essv6803353, essv6891102, essv6866904, essv6768365, essv6688133, essv6724326, essv6827519, essv6897514, essv6706052, essv6842273, essv6887863, essv6691442
SamplesSSM036, SSM083, SSM071, SSM027, SSM045, SSM064, SSM038, SSM097, SSM073, SSM023, SSM028, SSM084, SSM096, SSM089, SSM035, SSM031, SSM067, SSM086, SSM068, SSM040, SSM080, SSM095, SSM099
Known GenesSYT9
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2744079
Frequency
Sample Size96
Observed Gain0
Observed Loss23
Observed Complex0
Frequencyn/a


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