A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2744039



Internal ID10325009
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:3653785..3654127hg38UCSC Ensembl
Outerchr11:3675015..3675357hg19UCSC Ensembl
Cytoband11p15.4
Allele length
AssemblyAllele length
hg38343
hg19343
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6900494, essv6866896, essv6684911, essv6795852, essv6724322, essv6809222, essv6908666, essv6827513, essv6915964, essv6834720, essv6812080
SamplesSSM100, SSM071, SSM075, SSM045, SSM089, SSM014, SSM082, SSM016, SSM080, SSM076, SSM034
Known GenesART1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2744039
Frequency
Sample Size96
Observed Gain0
Observed Loss11
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer