A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2743903



Internal ID9978187
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:1164835..1165112hg38UCSC Ensembl
Outerchr11:1158452..1158762hg19UCSC Ensembl
Cytoband11p15.5
Allele length
AssemblyAllele length
hg38278
hg19311
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6912400, essv6763261, essv6953022, essv6856896, essv6831117, essv6795834, essv6709330, essv6695348, essv6716601
SamplesSSM071, SSM087, SSM041, SSM062, SSM081, SSM015, SSM037, SSM025, SSM043
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2743903
Frequency
Sample Size96
Observed Gain0
Observed Loss9
Observed Complex0
Frequencyn/a


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