A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2743899



Internal ID9978183
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr11:1147645..1148807hg38UCSC Ensembl
Outerchr11:1141553..1142715hg19UCSC Ensembl
Cytoband11p15.5
Allele length
AssemblyAllele length
hg381163
hg191163
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6834711, essv6931628, essv6823433, essv6731923, essv6681404, essv6771878, essv6804155, essv6965464, essv6919966, essv6856894, essv6768349, essv6724306, essv6770076, essv6775539, essv6791659, essv6937351, essv6935919, essv6897532, essv6976792, essv6924139, essv6940120, essv6783366, essv6827500, essv6953020
SamplesSSM008, SSM027, SSM045, SSM064, SSM079, SSM065, SSM087, SSM009, SSM021, SSM047, SSM018, SSM029, SSM017, SSM003, SSM033, SSM066, SSM068, SSM082, SSM020, SSM080, SSM022, SSM070, SSM025, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2743899
Frequency
Sample Size96
Observed Gain0
Observed Loss24
Observed Complex0
Frequencyn/a


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