A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2743632



Internal ID9977916
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:132203467..132203928hg38UCSC Ensembl
Outerchr10:134016971..134017432hg19UCSC Ensembl
Cytoband10q26.3
Allele length
AssemblyAllele length
hg38462
hg19462
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6944679, essv6850837, essv6970559, essv6783341, essv6795799, essv6791627, essv6904703, essv6856859, essv6823412, essv6799980
SamplesSSM013, SSM086, SSM072, SSM071, SSM028, SSM087, SSM023, SSM079, SSM068, SSM070
Known GenesDPYSL4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2743632
Frequency
Sample Size96
Observed Gain0
Observed Loss10
Observed Complex0
Frequencyn/a


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