A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2743629



Internal ID9977913
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:132190929..132191888hg38UCSC Ensembl
Outerchr10:134004433..134005392hg19UCSC Ensembl
Cytoband10q26.3
Allele length
AssemblyAllele length
hg38960
hg19960
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variantsdgv115e201
Supporting Variantsessv6958893, essv6771852, essv6915932, essv6944678, essv6779241, essv6681383, essv6935894, essv6842233
SamplesSSM065, SSM023, SSM084, SSM021, SSM026, SSM067, SSM033, SSM016
Known GenesDPYSL4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2743629
Frequency
Sample Size96
Observed Gain0
Observed Loss8
Observed Complex0
Frequencyn/a


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