A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2741606



Internal ID10295722
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:118758295..118758859hg38UCSC Ensembl
Outerchr10:120517807..120518371hg19UCSC Ensembl
Cytoband10q26.11
Allele length
AssemblyAllele length
hg38565
hg19565
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6775471, essv6944640, essv6691390, essv6731867, essv6970521, essv6896965, essv6799942, essv6919898, essv6771814, essv6856802, essv6952949, essv6672750, essv6769620, essv6695287, essv6958828, essv6688086, essv6724240, essv6924080
SamplesSSM036, SSM008, SSM045, SSM065, SSM087, SSM023, SSM028, SSM047, SSM018, SSM026, SSM017, SSM035, SSM031, SSM066, SSM072, SSM037, SSM025, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2741606
Frequency
Sample Size96
Observed Gain0
Observed Loss18
Observed Complex0
Frequencyn/a


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