A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2741073



Internal ID10295189
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:113678201..113679415hg38UCSC Ensembl
Outerchr10:115437960..115439174hg19UCSC Ensembl
Cytoband10q25.3
Allele length
AssemblyAllele length
hg381215
hg191215
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6940054, essv6672739, essv6924075, essv6787503, essv6965354, essv6791581, essv6856793, essv6912333, essv6919891, essv6948802, essv6716526, essv6976677, essv6775468, essv6896932, essv6944635, essv6958815, essv6935851, essv6681347, essv6731862, essv6842191, essv6970516, essv6931557, essv6695281
SamplesSSM027, SSM024, SSM087, SSM023, SSM028, SSM084, SSM021, SSM047, SSM018, SSM069, SSM029, SSM026, SSM017, SSM031, SSM033, SSM066, SSM020, SSM015, SSM037, SSM022, SSM070, SSM043, SSM012
Known GenesCASP7
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2741073
Frequency
Sample Size96
Observed Gain0
Observed Loss23
Observed Complex0
Frequencyn/a


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