A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2739964



Internal ID10323600
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:11707220..11713294hg38UCSC Ensembl
OuterchrX:11725340..11731414hg19UCSC Ensembl
CytobandXp22.2
Allele length
AssemblyAllele length
hg386075
hg196075
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6952410, essv6911808, essv6829376, essv6719916, essv6791033, essv6948317, essv6734678, essv6672820, essv6723733, essv6903597, essv6870163, essv6749101, essv6708838, essv6765119, essv6775021, essv6786936, essv6731344, essv6687662, essv6740384, essv6712325, essv6930985, essv6805822, essv6743481, essv6760391, essv6811684, essv6705503, essv6932640
SamplesSSM008, SSM024, SSM045, SSM074, SSM042, SSM002, SSM041, SSM090, SSM047, SSM069, SSM061, SSM035, SSM003, SSM044, SSM001, SSM066, SSM040, SSM020, SSM015, SSM053, SSM076, SSM010, SSM070, SSM025, SSM052, SSM049, SSM056
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2739964
Frequency
Sample Size96
Observed Gain0
Observed Loss27
Observed Complex0
Frequencyn/a


Hosted by The Centre for Applied Genomics
Grant support for DGV
Please read the usage disclaimer