A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2739858



Internal ID10323494
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
OuterchrX:2463790..2474176hg38UCSC Ensembl
OuterchrX:2381831..2392217hg19UCSC Ensembl
CytobandXp22.33
Allele length
AssemblyAllele length
hg3810387
hg1910387
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6805814, essv6672154, essv6932596, essv6876088, essv6690905, essv6873144, essv6737319, essv6923538, essv6919370, essv6734670, essv6778707, essv6964504, essv6859253, essv6767906, essv6671844, essv6939511, essv6754913, essv6927254, essv6884574, essv6841714, essv6969908, essv6795163
SamplesSSM036, SSM071, SSM027, SSM011, SSM064, SSM050, SSM074, SSM058, SSM028, SSM092, SSM084, SSM018, SSM017, SSM019, SSM003, SSM031, SSM067, SSM001, SSM022, SSM091, SSM095, SSM049
Known GenesDHRSX
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2739858
Frequency
Sample Size96
Observed Gain0
Observed Loss22
Observed Complex0
Frequencyn/a


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