Variant Details

Variant: esv2739718

Internal ID

10323354

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Outer	chr10:95447278..95448342	hg38	UCSC Ensembl
Outer	chr10:97207035..97208099	hg19	UCSC Ensembl

Cytoband

10q24.1

Allele length

Assembly	Allele length
hg38	1065
hg19	1065

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv6931539, essv6791562, essv6884904, essv6735007, essv6752372, essv6691369, essv6887796, essv6838356, essv6677553, essv6685543, essv6720418, essv6879301, essv6702163, essv6705969, essv6731840, essv6787479, essv6684855, essv6803632, essv6832976, essv6743831, essv6827422, essv6900431, essv6815218, essv6795748, essv6779187, essv6894417, essv6681330, essv6873481, essv6758034, essv6924053, essv6831047, essv6866796, essv6695261, essv6763222, essv6769409, essv6698566, essv6803292, essv6672719, essv6908593, essv6799925, essv6712767, essv6862057, essv6688070, essv6936729, essv6891031, essv6845735, essv6768295, essv6882126, essv6919872, essv6863487, essv6783283, essv6944614, essv6812025, essv6746623, essv6740827

Samples

SSM100, SSM059, SSM036, SSM008, SSM083, SSM071, SSM011, SSM064, SSM038, SSM097, SSM039, SSM009, SSM073, SSM093, SSM042, SSM088, SSM057, SSM023, SSM047, SSM018, SSM069, SSM096, SSM062, SSM089, SSM017, SSM035, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM014, SSM033, SSM085, SSM068, SSM081, SSM040, SSM072, SSM020, SSM053, SSM005, SSM080, SSM037, SSM077, SSM076, SSM010, SSM091, SSM055, SSM070, SSM095, SSM034, SSM052, SSM098, SSM049

Known Genes

SORBS1

Method

Sequencing

Analysis

Breakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads

Platform

Illumina HiSeq 2000

Comments

Reference

Wong_et_al_2012b

Pubmed ID

23290073

Accession Number(s)

esv2739718

Frequency

Sample Size	96
Observed Gain	0
Observed Loss	55
Observed Complex	0
Frequency	n/a