A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2739485



Internal ID10323121
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:91055626..91055985hg38UCSC Ensembl
Outerchr10:92815383..92815742hg19UCSC Ensembl
Cytoband10q23.31
Allele length
AssemblyAllele length
hg38360
hg19360
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6944607, essv6698560, essv6736276, essv6702158, essv6834647
SamplesSSM038, SSM039, SSM023, SSM082, SSM007
Known GenesLINC00502
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2739485
Frequency
Sample Size96
Observed Gain0
Observed Loss5
Observed Complex0
Frequencyn/a


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