A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2739465



Internal ID9973806
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:137719886..137720106hg38UCSC Ensembl
Outerchr9:140614338..140614558hg19UCSC Ensembl
Cytoband9q34.3
Allele length
AssemblyAllele length
hg38221
hg19221
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6900350, essv6912214, essv6927592, essv6866650, essv6803219, essv6968251
SamplesSSM100, SSM073, SSM089, SSM019, SSM015, SSM004
Known GenesEHMT1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2739465
Frequency
Sample Size96
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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