A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2739304



Internal ID10322940
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:135663592..135664132hg38UCSC Ensembl
Outerchr9:138555438..138555978hg19UCSC Ensembl
Cytoband9q34.3
Allele length
AssemblyAllele length
hg38541
hg19541
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6976393, essv6850550, essv6799809, essv6958569, essv6695114, essv6809086, essv6775341, essv6842055
SamplesSSM075, SSM084, SSM029, SSM026, SSM086, SSM066, SSM072, SSM037
Known GenesLCN9
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2739304
Frequency
Sample Size96
Observed Gain0
Observed Loss8
Observed Complex0
Frequencyn/a


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