A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2739238



Internal ID10322874
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:134710387..134710773hg38UCSC Ensembl
Outerchr9:137602233..137602619hg19UCSC Ensembl
Cytoband9q34.3
Allele length
AssemblyAllele length
hg38387
hg19387
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6970348
SamplesSSM028
Known GenesCOL5A1
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2739238
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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