A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2739226



Internal ID9973567
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:134524599..134524875hg38UCSC Ensembl
Outerchr9:137416445..137416721hg19UCSC Ensembl
Cytoband9q34.3
Allele length
AssemblyAllele length
hg38277
hg19277
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6803215, essv6976375, essv6958554, essv6890934, essv6866631, essv6819216, essv6850545, essv6861894, essv6698490, essv6965120, essv6687975
SamplesSSM027, SSM038, SSM097, SSM073, SSM088, SSM029, SSM026, SSM089, SSM035, SSM086, SSM078
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2739226
Frequency
Sample Size96
Observed Gain0
Observed Loss11
Observed Complex0
Frequencyn/a


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