A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2739221



Internal ID9973562
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:134476000..134476354hg38UCSC Ensembl
Outerchr9:137367846..137368200hg19UCSC Ensembl
Cytoband9q34.2
Allele length
AssemblyAllele length
hg38355
hg19355
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6815115, essv6716358, essv6709175, essv6935708, essv6737608, essv6819215, essv6866630, essv6799801, essv6771669, essv6681212, essv6724108, essv6775335, essv6915791, essv6905930, essv6795618, essv6965119, essv6823239, essv6970347, essv6787338, essv6948646, essv6861893, essv6838245, essv6935669, essv6705848, essv6958553
SamplesSSM083, SSM071, SSM027, SSM024, SSM045, SSM079, SSM065, SSM050, SSM088, SSM002, SSM041, SSM028, SSM021, SSM069, SSM026, SSM089, SSM003, SSM033, SSM066, SSM040, SSM072, SSM078, SSM016, SSM077, SSM043
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2739221
Frequency
Sample Size96
Observed Gain0
Observed Loss25
Observed Complex0
Frequencyn/a


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