A curated catalogue of human genomic structural variation

Variant Details

Variant: esv2738777

Internal ID9973118
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:93010079..93010987hg38UCSC Ensembl
Outerchr9:95772361..95773269hg19UCSC Ensembl
Allele length
AssemblyAllele length
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6850476, essv6915746, essv6698459, essv6931336, essv6724064, essv6876325, essv6923848, essv6944405, essv6965041, essv6693709, essv6815071, essv6809040, essv6897323, essv6787290, essv6884794, essv6970284, essv6681171, essv6894260, essv6834496, essv6731663, essv6919688, essv6976282, essv6727899, essv6768162, essv6967729, essv6927532, essv6716312, essv6779011, essv6803175, essv6890894, essv6791387, essv6895120, essv6767898, essv6667985, essv6952753, essv6882004, essv6831642, essv6823196, essv6856490, essv6795568, essv6775295, essv6935616, essv6806046, essv6802243, essv6684510, essv6958463, essv6900308, essv6771615, essv6842006
SamplesSSM010, SSM065, SSM027, SSM092, SSM082, SSM086, SSM033, SSM084, SSM099, SSM043, SSM064, SSM025, SSM020, SSM071, SSM016, SSM001, SSM045, SSM067, SSM094, SSM097, SSM077, SSM005, SSM012, SSM100, SSM017, SSM009, SSM066, SSM028, SSM029, SSM095, SSM030, SSM047, SSM073, SSM069, SSM021, SSM087, SSM038, SSM046, SSM019, SSM023, SSM079, SSM074, SSM004, SSM075, SSM026, SSM008, SSM098, SSM018, SSM070
Known GenesFGD3
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Pubmed ID23290073
Accession Number(s)esv2738777
Sample Size96
Observed Gain0
Observed Loss49
Observed Complex0

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