A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2738766



Internal ID10322402
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:91714258..91714901hg38UCSC Ensembl
Outerchr9:94476540..94477183hg19UCSC Ensembl
Cytoband9q22.31
Allele length
AssemblyAllele length
hg38644
hg19644
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6965038, essv6923847, essv6970282, essv6672422, essv6976280, essv6908420, essv6895109, essv6927531, essv6779009, essv6944403, essv6771614, essv6935274, essv6830891, essv6799756, essv6767887, essv6861837, essv6862109, essv6850474, essv6915745, essv6684705, essv6783054, essv6958459, essv6939875, essv6802232, essv6712611, essv6904497, essv6809039, essv6695059, essv6935615, essv6787289
SamplesSSM008, SSM027, SSM075, SSM011, SSM065, SSM013, SSM009, SSM042, SSM088, SSM023, SSM028, SSM021, SSM018, SSM069, SSM029, SSM026, SSM019, SSM003, SSM031, SSM067, SSM014, SSM086, SSM068, SSM081, SSM072, SSM016, SSM037, SSM022, SSM034, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2738766
Frequency
Sample Size96
Observed Gain0
Observed Loss30
Observed Complex0
Frequencyn/a


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