A curated catalogue of human genomic structural variation

Variant Details

Variant: esv2738750

Internal ID9973091
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:90861050..90862031hg38UCSC Ensembl
Outerchr9:93623332..93624313hg19UCSC Ensembl
Allele length
AssemblyAllele length
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6958456, essv6803172, essv6677373, essv6845605, essv6894257, essv6701967, essv6908416, essv6716308, essv6919686, essv6712608, essv6895065, essv6904493, essv6705801, essv6695055, essv6823195, essv6850472, essv6709134, essv6965035, essv6827249, essv6767876, essv6944400, essv6862076, essv6783053, essv6752224, essv6681168, essv6771611, essv6970280, essv6912135, essv6935251, essv6935613, essv6687925, essv6939869, essv6931331, essv6856485, essv6952749, essv6720261, essv6672417, essv6948589, essv6923844, essv6735054, essv6779006, essv6787285, essv6760643, essv6927526, essv6809036, essv6838200, essv6815067, essv6724059, essv6731660, essv6795563, essv6799751, essv6834493, essv6879183, essv6791383, essv6976278
SamplesSSM065, SSM022, SSM007, SSM027, SSM013, SSM082, SSM086, SSM033, SSM061, SSM042, SSM040, SSM043, SSM031, SSM035, SSM025, SSM072, SSM020, SSM071, SSM057, SSM032, SSM039, SSM024, SSM045, SSM067, SSM083, SSM041, SSM077, SSM012, SSM093, SSM085, SSM017, SSM011, SSM028, SSM029, SSM003, SSM047, SSM073, SSM069, SSM021, SSM037, SSM087, SSM019, SSM023, SSM079, SSM068, SSM044, SSM075, SSM015, SSM026, SSM014, SSM008, SSM098, SSM018, SSM070, SSM080
Known GenesSYK
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Pubmed ID23290073
Accession Number(s)esv2738750
Sample Size96
Observed Gain0
Observed Loss55
Observed Complex0

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