A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2738613



Internal ID9972954
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:77915094..77915351hg38UCSC Ensembl
Outerchr9:80530010..80530267hg19UCSC Ensembl
Cytoband9q21.2
Allele length
AssemblyAllele length
hg38258
hg19258
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6927516, essv6681152, essv6900292, essv6890878, essv6743684, essv6967607, essv6806030, essv6720245
SamplesSSM053, SSM033, SSM097, SSM100, SSM019, SSM044, SSM074, SSM004
Known GenesGNAQ
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2738613
Frequency
Sample Size96
Observed Gain0
Observed Loss8
Observed Complex0
Frequencyn/a


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