A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2738607



Internal ID10322243
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr10:79332349..79333020hg38UCSC Ensembl
Outerchr10:81092106..81092777hg19UCSC Ensembl
Cytoband10q22.3
Allele length
AssemblyAllele length
hg38672
hg19672
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6927687, essv6668062, essv6896632, essv6712752, essv6685410, essv6779176, essv6740815, essv6812009, essv6850730, essv6856748, essv6720404, essv6873469, essv6677540, essv6760747, essv6709320, essv6806164, essv6746607, essv6976622, essv6894404, essv6906718, essv6709262, essv6681320, essv6879292, essv6705953, essv6866778, essv6900418, essv6936551, essv6862035, essv6769276, essv6915883, essv6755318, essv6791547, essv6768282, essv6809163, essv6887783, essv6965310, essv6734997, essv6698554, essv6684839, essv6758024, essv6831034, essv6815204, essv6743813, essv6775444, essv6737679, essv6823347, essv6935816, essv6863376, essv6845723, essv6799911, essv6882113, essv6838344, essv6834639, essv6803465, essv6691353, essv6728051, essv6969017, essv6795731, essv6695247, essv6897436, essv6716497, essv6832843, essv6948774, essv6912305, essv6672696, essv6842157, essv6765602, essv6931526, essv6891016, essv6819361, essv6908579, essv6924034, essv6783263, essv6731826, essv6827407, essv6763208, essv6970483, essv6787461, essv6724208, essv6958776, essv6904644, essv6884895, essv6703820, essv6870518, essv6803279, essv6919856, essv6752360, essv6944590, essv6876447, essv6771783, essv6736187, essv6702147, essv6749466
SamplesSSM100, SSM059, SSM036, SSM008, SSM083, SSM071, SSM027, SSM024, SSM075, SSM045, SSM046, SSM011, SSM064, SSM079, SSM065, SSM087, SSM038, SSM097, SSM039, SSM013, SSM009, SSM073, SSM093, SSM050, SSM074, SSM042, SSM088, SSM002, SSM041, SSM057, SSM023, SSM058, SSM028, SSM092, SSM084, SSM090, SSM021, SSM047, SSM018, SSM069, SSM061, SSM029, SSM096, SSM062, SSM026, SSM089, SSM017, SSM019, SSM094, SSM032, SSM003, SSM031, SSM067, SSM044, SSM001, SSM014, SSM086, SSM033, SSM066, SSM006, SSM085, SSM068, SSM081, SSM040, SSM072, SSM082, SSM020, SSM007, SSM015, SSM078, SSM016, SSM053, SSM005, SSM080, SSM037, SSM077, SSM076, SSM010, SSM091, SSM055, SSM070, SSM095, SSM034, SSM004, SSM099, SSM043, SSM052, SSM098, SSM049, SSM056, SSM030, SSM063, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2738607
Frequency
Sample Size96
Observed Gain0
Observed Loss93
Observed Complex0
Frequencyn/a


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