A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2738606



Internal ID10322242
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:77086927..77087509hg38UCSC Ensembl
Outerchr9:79701843..79702425hg19UCSC Ensembl
Cytoband9q21.2
Allele length
AssemblyAllele length
hg38583
hg19583
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6746484, essv6749330, essv6752217, essv6861817, essv6935592, essv6958431, essv6876310, essv6681151, essv6870399, essv6755171, essv6970261, essv6787261, essv6856467, essv6830874, essv6912122, essv6757913, essv6693043, essv6740665, essv6778991
SamplesSSM059, SSM087, SSM088, SSM057, SSM058, SSM028, SSM092, SSM090, SSM021, SSM069, SSM026, SSM067, SSM001, SSM033, SSM081, SSM015, SSM055, SSM052, SSM056
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2738606
Frequency
Sample Size96
Observed Gain0
Observed Loss19
Observed Complex0
Frequencyn/a


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