A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2738601



Internal ID9972942
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:76768646..76769346hg38UCSC Ensembl
Outerchr9:79383562..79384262hg19UCSC Ensembl
Cytoband9q21.2
Allele length
AssemblyAllele length
hg38701
hg19701
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6752215
SamplesSSM057
Known GenesPCA3, PRUNE2
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2738601
Frequency
Sample Size96
Observed Gain0
Observed Loss1
Observed Complex0
Frequencyn/a


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