A curated catalogue of human genomic structural variation

Variant Details

Variant: esv2738533

Internal ID9972873
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr9:69162988..69163347hg38UCSC Ensembl
Outerchr9:71777904..71778263hg19UCSC Ensembl
Allele length
AssemblyAllele length
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6939844, essv6838177, essv6830867, essv6787250, essv6927510, essv6881986, essv6716290, essv6970252, essv6944371, essv6919660, essv6850428, essv6681141, essv6731643, essv6873347, essv6890867, essv6712581, essv6976236, essv6791359, essv6841988, essv6856447, essv6923817, essv6827222, essv6948569, essv6870393, essv6799720, essv6795536, essv6677346, essv6819122, essv6695030, essv6701939, essv6727873, essv6783025, essv6709115, essv6900286, essv6687904, essv6724029, essv6897299, essv6803148, essv6908392, essv6866540, essv6958414, essv6815041, essv6861805, essv6912112, essv6698439, essv6692265, essv6705780, essv6672380, essv6811883, essv6935007
SamplesSSM022, SSM086, SSM091, SSM033, SSM084, SSM099, SSM042, SSM040, SSM078, SSM043, SSM088, SSM089, SSM090, SSM031, SSM035, SSM072, SSM071, SSM001, SSM032, SSM039, SSM024, SSM045, SSM094, SSM083, SSM097, SSM041, SSM077, SSM100, SSM017, SSM028, SSM029, SSM003, SSM047, SSM073, SSM069, SSM037, SSM087, SSM038, SSM046, SSM019, SSM023, SSM068, SSM015, SSM026, SSM014, SSM018, SSM076, SSM081, SSM070, SSM080
Known GenesTJP2
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Pubmed ID23290073
Accession Number(s)esv2738533
Sample Size96
Observed Gain0
Observed Loss50
Observed Complex0

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