A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2737986



Internal ID9972325
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr8:143273629..143274030hg38UCSC Ensembl
Outerchr8:144355799..144356200hg19UCSC Ensembl
Cytoband8q24.3
Allele length
AssemblyAllele length
hg38402
hg19402
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6768094, essv6948525, essv6795473, essv6923755, essv6841935, essv6958314
SamplesSSM071, SSM024, SSM064, SSM084, SSM018, SSM026
Known GenesGLI4
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2737986
Frequency
Sample Size96
Observed Gain0
Observed Loss6
Observed Complex0
Frequencyn/a


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