A curated catalogue of human genomic structural variation




Variant Details

Variant: esv2737965



Internal ID10321601
Landmark
Location Information
TypeCoordinatesAssemblyOther Links
Outerchr8:143179499..143180279hg38UCSC Ensembl
Outerchr8:144260916..144261696hg19UCSC Ensembl
Cytoband8q24.3
Allele length
AssemblyAllele length
hg38781
hg19781
Variant TypeCNV deletion
Copy Number
Allele State
Allele Origin
Probe Count
Validation Flag
Merged StatusM
Merged Variants
Supporting Variantsessv6791286, essv6931248, essv6740605, essv6694967, essv6841933, essv6778922, essv6894299, essv6861729, essv6927459, essv6935521, essv6752167, essv6681089, essv6845537, essv6814984, essv6976133, essv6958306, essv6900239, essv6912049, essv6767287, essv6803101, essv6698399, essv6876266, essv6805979, essv6775221, essv6952672, essv6782978, essv6970184, essv6723967, essv6755116, essv6768093, essv6760590, essv6701869, essv6923750, essv6734388, essv6915675, essv6672264, essv6856341, essv6834420, essv6731580, essv6801599, essv6749280, essv6691140, essv6948522, essv6799646, essv6705726, essv6716238, essv6787186, essv6866461, essv6873311, essv6967074, essv6944307
SamplesSSM100, SSM036, SSM008, SSM024, SSM045, SSM064, SSM087, SSM038, SSM039, SSM009, SSM073, SSM074, SSM088, SSM057, SSM023, SSM058, SSM028, SSM092, SSM084, SSM021, SSM047, SSM018, SSM069, SSM061, SSM029, SSM026, SSM089, SSM019, SSM031, SSM067, SSM033, SSM066, SSM085, SSM068, SSM040, SSM072, SSM082, SSM020, SSM007, SSM015, SSM016, SSM037, SSM077, SSM091, SSM070, SSM025, SSM004, SSM043, SSM052, SSM056, SSM012
Known Genes
MethodSequencing
AnalysisBreakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads
PlatformIllumina HiSeq 2000
Comments
ReferenceWong_et_al_2012b
Pubmed ID23290073
Accession Number(s)esv2737965
Frequency
Sample Size96
Observed Gain0
Observed Loss51
Observed Complex0
Frequencyn/a


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