Variant Details

Variant: esv2737771

Internal ID

9972110

Landmark

Location Information

Type	Coordinates	Assembly	Other Links
Outer	chr8:141334805..141336661	hg38	UCSC Ensembl
Outer	chr8:142344904..142346760	hg19	UCSC Ensembl

Cytoband

8q24.3

Allele length

Assembly	Allele length
hg38	1857
hg19	1857

Variant Type

CNV deletion

Copy Number

Allele State

Allele Origin

Probe Count

Validation Flag

Merged Status

Merged Variants

Supporting Variants

essv6723950, essv6850310, essv6908320, essv6944286, essv6787169, essv6894167, essv6887581, essv6740594, essv6861721, essv6866445, essv6904404, essv6958281, essv6701852, essv6743639, essv6778904, essv6976115, essv6964870, essv6856332, essv6838096, essv6672238, essv6866441, essv6935498, essv6939767, essv6861719, essv6782959, essv6667942, essv6684622, essv6672240, essv6870338, essv6952655, essv6823087, essv6861320, essv6819041, essv6958280, essv6795445, essv6819040, essv6727801, essv6894165, essv6850311, essv6870337, essv6755110, essv6873300, essv6749274, essv6799629, essv6795446, essv6677271, essv6908322, essv6707920, essv6876256, essv6850312, essv6720160, essv6799630, essv6964871, essv6672239, essv6866442, essv6677270, essv6866444, essv6734837, essv6856330, essv6763044, essv6720159, essv6838097, essv6931235, essv6908321, essv6879107

Samples

SSM083, SSM071, SSM027, SSM045, SSM046, SSM011, SSM079, SSM087, SSM039, SSM013, SSM093, SSM088, SSM023, SSM058, SSM092, SSM090, SSM021, SSM069, SSM029, SSM096, SSM062, SSM026, SSM089, SSM032, SSM031, SSM067, SSM044, SSM014, SSM086, SSM006, SSM068, SSM072, SSM020, SSM078, SSM053, SSM022, SSM091, SSM025, SSM034, SSM052, SSM098, SSM049, SSM056, SSM030

Known Genes

Method

Sequencing

Analysis

Breakdancer:4 times standard deviation,VariationHunter:4 times standard deviation and at least 3 supportting reads

Platform

Illumina HiSeq 2000

Comments

Reference

Wong_et_al_2012b

Pubmed ID

23290073

Accession Number(s)

esv2737771

Frequency

Sample Size	96
Observed Gain	0
Observed Loss	44
Observed Complex	0
Frequency	n/a